Welcome to S t e i n e r N e t

NOTE: SteinerNet is being deprecated and will be shut down in the near future. We recommend you use Omics Integrator instead.


Revealing the Hidden Components in Regulatory and Signaling Networks by Integrating Proteomics, Transcriptome and Interactome Data

Sample files: Interactome File, Terminal file, and Transcription factor to DNA file

Protein-Protein Interactions


Upload an interactome here:
OR select a database interactome:

OR paste a list:

Terminal Nodes with Penalties


Upload terminals file here*:
OR paste a list of proteins or genes with penalty values*:
*Please check the input format for terminals
**Terminal names must be consistent with naming in the interactome. Some external pages can be used to convert names if you need; such as DAVID, or HUGO

(OPTIONAL)Transcription Factor to DNA Interactions


Upload a file here:
OR select a database for TF to DNA interactions:
OR Paste the TF to DNA interactions:
Beta for Protein Terminals:
Beta for DNA Terminals:
Your Email Address:

References:

1. Huang S.S., Fraenkel E. Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks Science Signaling (2009) 2(81):ra40.

2. Tuncbag N., McCallum S., Huang S.S. Fraenkel E. SteinerNet: A Web Server for Integrating "Omic" data to Discover Hidden Components of Response Pathways Nucl. Acids Res. (2012) doi: 10.1093/nar/gks445.


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