Python: module TAMO.DataSources.Novartis

TAMO.DataSources.Novartis

index
/home/David_Gordon/docs/TAMO/DataSources/Novartis.py

Novartis.py Loads Novartis mapping Data and Dataset as a HT.Dataset object id2feature(id) id2other(id,other), where "other" can be Copyright (2005) Whitehead Institute for Biomedical Research (except as noted below) All Rights Reserved Author: David Benjamin Gordon

Modules

TAMO

Functions

humandata()

id2feature(id)

id2ll(id)

id2locuslink(id)

id2other(id, other)

id2unigene(id)

id2uniprot(id)

load_anno()

Data

ANNO = {}
ANNOFILE = '/etc/TAMOdata/Novartis/gnf1h-anntable.txt.gz'
DATAFILE = '/etc/TAMOdata/Novartis/U133A+GNF1B_101402.AD.txt'
REVANNO = {}
ref = {'desc': 10, 'ensenbl': 8, 'family': 12, 'feature': 2, 'func': 11, 'location': 4, 'locuslink': 5, 'name': 1, 'refseq': 5, 'unigene': 6, ...}

Data
		ANNO = {} ANNOFILE = '/etc/TAMOdata/Novartis/gnf1h-anntable.txt.gz' DATAFILE = '/etc/TAMOdata/Novartis/U133A+GNF1B_101402.AD.txt' REVANNO = {} ref = {'desc': 10, 'ensenbl': 8, 'family': 12, 'feature': 2, 'func': 11, 'location': 4, 'locuslink': 5, 'name': 1, 'refseq': 5, 'unigene': 6, ...}